Unless I'm overlooking something simple, the new java-resources content type in IDEA 13 seems to make it impossible to include resources alongside sources. Using Gradle, I do this in some cases:
apply plugin: 'java'
sourceSets.main.resources.srcDir("src/main/java")
With IDEA 12, both src/main/java and src/main/resources would get marked as source folders. With IDEA 13, src/main/java ends up marked as a resources folder only.
To give a specific case of why I'd like to have some resources alongside sources, Scene Builder for JavaFX doesn't find controller (code-behind) files when they're in a separate resources folder.
Is there a way I can hava src/main/java include both sources and resources?